Transverse-momentum-dependent (TMD) distributions describe the configuration of quarks and gluons inside protons and nuclei in three-dimensional momentum space. Observables in scattering experiments can be calculated with the help of TMD factorization formulas, where the target and projectile are represented with non-perturbative TMD distributions, which are separated from the short-distance perturbative part of the collision. A complementary approach to study the momentum structure of protons and nuclei at high energy is the Color Glass Condensate which is an effective theory for the high-gluon-density region of ultra-relativistic particles. We introduce both theories and we discuss connections between them. We present phenomenological results derived from these connections.